Illumina MiSeq Paired-end Sequencing of Acetobacter lovaniensis LX9 - SRA

SRX24980126: Illumina MiSeq Paired-end Sequencing of Acetobacter lovaniensis LX9
2 ILLUMINA (Illumina MiSeq) runs: 587,482 spots, 169.7M bases, 87.1Mb downloads

Design: Skim sequencing - standard Illumina Nextera kits with a diluted tagmentation enzyme (1/3 concentration). Trimmomatic output files

Submitted by: Cornell University

Study: Spoilage investigation of pasteurized apple juice with visual defects identified Acetobacter spp. as the primary spoilage agents

PRJNA1125129 • SRP514496 • All experiments • All runs

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Acetobacter fabarum and Acetobacter lovaniensis isolated from spoiled pasteurized apple juice with unusual defects. The said defect is a formation of gels after the apple juice was stored at ambient temperature for 45-60 days. The isolates appeared to tolerate dimethyl dicarbonate, a microbial control agent, added to the juice at 238 ppm during processing.

Sample:

SAMN41914981 • SRS21682869 • All experiments • All runs

Organism: Acetobacter lovaniensis

Library:

Name: AL_LX9_trimmed

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 2 runs, 587,482 spots, 169.7M bases, 87.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR29468158	543,623	163.3M	82.8Mb	2024-06-20
SRR29479672	43,859	6.4M	4.3Mb	2024-06-20

ID:: 33316369

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